CPT CODEPathology/LabStatus A

CPT Code 88364Complete Billing & Coding Guide (2026)Insitu hybridization (fish)

Reviewed by AAPC-Certified Coders2026 Medicare Fee ScheduleCMS + AMA Sources
Medicare Payment
$127
Non-facility · National avg
Facility
$127
Total RVU
3.79
Global
ZZZ
Payment
$127
non-facility
Work RVU
0.68
physician effort
Global Period
ZZZ
post-op days
Bundling Edits
2
NCCI pairs
Last reviewed: May 2026Reviewed by the Go Medical Billing Editorial TeamAAPC-certified coders

About CPT 88364

CPT 88364 is a Current Procedural Terminology code in the Pathology/Lab category maintained by the American Medical Association. The CMS short descriptor reads "Insitu hybridization (fish)". For the full AMA long descriptor and clinical guidance, refer to the current CPT code manual.

Add-on codes cannot be billed alone and inherit their global period from the primary procedure. Payer scrubbers will reject add-on codes submitted without a valid base code on the same claim.

Pro Tip

88364 has 2 NCCI bundling edit pairs documented. Run your scrubber against the NCCI quarterly update before submission. When clinically warranted, use modifier 59 or the X-modifiers (XE, XS, XP, XU) to bypass an indicator-1 edit, with chart documentation supporting the distinct service.

Code Properties

Global Period
ZZZ
Add-on code (global period matches base procedure)
Status Indicator
A
Active. Payment under Medicare PFS.
Conversion Factor
$33.4009
CMS national rate
Effective Date
2026-04-01
per CMS publication

RVU Breakdown

Every CPT code’s Medicare payment is calculated from three Relative Value Unit components: physician work, practice expense, and malpractice. Together they multiply by the conversion factor to produce the payment amount.

RVU Composition
3.79 total RVU
0.68
3.09
Work RVU
0.68 · 18%
Physician time + skill
Practice Expense
3.09 · 82%
Office & equipment
Malpractice
0.02 · 1%
Liability insurance
Non-Facility
Private office · urgent care · ambulatory
Most billed
$126.59
3.79 RVU × $33.4009 CF
Facility
Hospital · ASC · nursing home
$126.59
3.79 RVU × $33.4009 CF

Payment = Total RVU × Conversion Factor ($33.4009) × Geographic Adjustment (GPCI). National averages shown. Actual payment varies by locality.

Medicare Payment by State

Medicare adjusts payment by locality based on GPCI (Geographic Practice Cost Index). Higher cost-of-living areas like California and New York pay more. Rural states pay less. Top 12 states shown.

DC
$146
CA
$146
AK
$144
WA
$142
NJ
$141
HI
$140
MA
$140
NY
$140
CT
$135
CO
$133
OR
$132
MD
$131

Showing top 12 of 53 states. Full locality data available in CMS PFS Locality file.

NCCI Bundling Edits

2 pairs

These codes trigger National Correct Coding Initiative edits when billed with 88364. An indicator of 0 means the pair cannot be unbundled. Indicator 1 means modifier 59 or X-modifiers may allow separate billing with supporting documentation.

Featured pair
NCCI Bundling Verdict

88364 + 88346: bundled, modifier may bypass (indicator 1)

The most-asked bundling question on this code. Verdict pulled from the current NCCI quarterly file.

Modifier indicator 1 means a modifier may bypass the edit when the clinical scenario supports a distinct, separately identifiable service. Most billers default to modifier 59, but payers prefer the more specific X-modifiers (XE, XS, XP, XU) and pay them with less audit scrutiny. Documentation must establish the separation factor.

NCCI Rationale

CPT Manual or CMS manual coding instruction

Live NCCI verdict, updated quarterly against the CMS file.Check another pair
Common Denial Risk

Billing 88364 alongside a bundled code without the correct modifier generates CARC 97 denials. Payers often flag these as audit risks. Document medical necessity for the separate service and apply modifier 59 or the appropriate X-modifier (XE, XS, XP, XU) only when clinically justified.

AR Recovery Note

Bundling denials on 88364 are recoverable when the edit indicator is 1 and the chart documents a distinct, separately identifiable service. Our coders verify the indicator and pick the precise X-modifier (XE, XS, XP, XU) instead of defaulting to modifier 59.

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Denied on 88364 + 88346 with the wrong modifier? Send us the EOB.

Most bundling denials on 88364 are recoverable when an X-modifier replaces a generic mod 59 and the chart supports a distinct service. A coder will read the EOB and the operative or procedure note for you.

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Applicable Modifiers

Modifiers commonly paired with 88364 based on its category. Apply only when the clinical circumstance warrants. Incorrect modifier use is a top audit target.

26
Professional component — physician interpretation/report only (no technical component)
When to use · When the physician only interprets/reads a diagnostic test performed by another entity (e.g., reading an echo performed at a hospital).
33
Preventive services — when the primary purpose is delivery of an evidence-based service per USPSTF A or B recommendation
When to use · Screening services (colonoscopy, mammography, etc.) to indicate the primary purpose is preventive. Waives cost-sharing under ACA.
76
Repeat procedure or service by same physician
When to use · When the same physician repeats the exact same procedure on the same day (e.g., repeat EKG after treatment, repeat X-ray after reduction).
77
Repeat procedure by another physician
When to use · When a different physician repeats the same procedure on the same day.
91
Repeat clinical diagnostic laboratory test on the same day for the same patient
When to use · When the same lab test is repeated on the same day for clinical reasons (not equipment malfunction).
GA
Waiver of liability statement issued as required by payer policy (ABN on file)
When to use · Medicare: when an Advance Beneficiary Notice (ABN) has been signed by the patient for services that may not be covered.
GY
Item or service statutorily excluded or does not meet the definition of any Medicare benefit
When to use · Service is never covered by Medicare (e.g., cosmetic procedures). May bill patient directly.
GZ
Item or service expected to be denied as not reasonable and necessary — no ABN on file
When to use · When a service is expected to be denied by Medicare and no ABN was obtained. Provider cannot bill the patient.
AR Recovery Note

Component split modifiers (26 professional, TC technical) are the most under-applied modifiers in diagnostic billing. Practices that bill global on services where they only provided the read silently invite refund requests. We split components correctly at submission.

Supporting ICD-10 Diagnoses

These diagnosis codes commonly support medical necessity for CPT 88364. Using the correct ICD-10 prevents CARC 50 denials. Payer rejects when the diagnosis doesn’t support the procedure.

1
CMS LCD: Billing and Coding: Genetic Testing for Oncology
CMS LCD
C00.0See ICD-10-CM tabular index
C00.1See ICD-10-CM tabular index
C00.3See ICD-10-CM tabular index
C00.4See ICD-10-CM tabular index
C00.6See ICD-10-CM tabular index
C00.8See ICD-10-CM tabular index
C01See ICD-10-CM tabular index
C02.0See ICD-10-CM tabular index
C02.1See ICD-10-CM tabular index
C02.2See ICD-10-CM tabular index
C02.4See ICD-10-CM tabular index
C02.8See ICD-10-CM tabular index
AR Recovery Note

CARC 50 medical-necessity denials carry both rework cost and an audit-risk signal when patterns repeat. Our coders verify ICD-10 specificity and policy alignment at the coding stage so these losses get prevented upstream.

Free 90-Day AR Recovery Audit

Find the revenue leakage in your 88364 claims.

Wrong modifier, missing documentation, bundling without justification, stale ICD-10 linkage: these are the silent revenue killers on Pathology/Lab claims. Our AAPC-certified team audits your last 90 days of 88364 claims, surfaces the recoverable dollars, and appeals them. Free, no obligation.

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FAQ

Everything about CPT 88364

What does CPT code 88364 cover?

CPT 88364 is a Current Procedural Terminology code in the Pathology/Lab category maintained by the American Medical Association. The CMS short descriptor reads "Insitu hybridization (fish)". For the full AMA long descriptor and clinical guidance, refer to the current CPT code manual.

What is the Medicare payment for CPT 88364?

The national average Medicare payment for CPT 88364 is approximately $126.59 in a non-facility setting and $126.59 in a facility setting. Actual payment varies by locality based on GPCI adjustments. Total RVU is 3.79 with a conversion factor of $33.4009.

What is the global period for CPT 88364?

CPT 88364 is an add-on code (indicator ZZZ). Its global period matches the base procedure it's billed with. Cannot be billed alone. Must be paired with a primary code per CPT guidelines.

What codes bundle with CPT 88364?

CPT 88364 has NCCI Procedure-to-Procedure edits with 2+ codes including 88346, 96523. Modifier indicator 0 means the edit cannot be bypassed. Indicator 1 means modifier 59 or X-modifiers may allow separate billing with documentation.

CMS Medicare Physician Fee ScheduleNCCI Edits · Current QuarterAMA CPT Code Set

CPT codes and descriptions are copyright of the American Medical Association. RVU values reflect current CMS publications. Actual payment varies by locality. Commercial payer rates vary by contract.

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We audit your last 90 days of claims and surface the revenue leakage: wrong modifiers, missed bundling appeals, ICD-10 specificity gaps. AAPC-certified coders. 2.49% of collections. No setup fees.